Qualipart

This program computes several indices to measure the correspondence of a given tree (in Newick format) to a distance array (Phylip format). It realizes a representation of the partition as a tree of boxes, each one correspondig to a class. This permits to compare several partitions to the same distance and to appreciate the quality of a partition according to distance array.

Qualipart.jar
Java package ready to run.
 
Qualipart.pdf
A. Guénoche, H. Garreta (2002) Representation and evaluation of partitions, Proceedings of IFCS'2002, K. Jajuga et al. (Eds), Springer, pp 131-138.